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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792193.1_cds_XP_016511039.1_2307
CDS Infomation

[gene=LOC107828265] [db_xref=GeneID:107828265] [protein=afadin- and alpha-actinin-binding protein-like] [protein_id=XP_016511039.1] [location=complement(join(1268..1367,1634..1677,2742..2861,2984..3061,3165..3275,5006..5083,5157..5222,5299..5373,5482..5544,5634..5723,5800..5896,6906..7003,7839..7950,8043..8077,8178..8210))] [gbkey=CDS]
Sequence

ATGCCTCCTACAGACAATGATTTCGATCTCAGACGCACATCTACTCCTCCTAGCGGCATG
GGAATCAGTGAGTATAATTTTGCAGATATAAACAATTTGGAGCACTGTGCTAAGTATCTC
AACCAAACTCTGGTCACCTTTGGATTCCCTGCTTCCCTCGATCTCTTTGCCCATGACCCT
GTTTCTATAGCAAGGACTTGCAACTGTGTATATGCACTATTGCAGCAGAGGCAGAGGGAT
ATTGAATTCAGAGTGTCTGCAAATGAGCAGAGACAACGGCTGTTATCAGACATATCAAGA
TTAGAGGCCAAAGTGGAGAGGCTGGAATCTCAAATACAAGCCAAAGATAGAGAGATAGCT
ACAATTACTAGAGAGGAAGCTAAAGCTACAGCAGCTTTGAAGGCACAAATTGACAAATTG
CAGAAGGAAAGAGATGAGTTTCAGAGGATGGTTCTTGGTAATCAGCAAGTCAGAACTCAG
CAGATATATGAAATGAAGAAAAAGGAAAAGGAGTATATAAAGTTGCAAGAGAGGCTAAAT
CAAGTGTTGATGGAGAAAAAGAAGGAATCCAGATCAGGCATGGAAATAATGAATTTACTT
CAGAAAGAAGGGCGTCAACGTGGGACATGGAATGGGAAGAAGGCTGACAATGACTTCTAC
AAGAAGATTGTGGATGCTTATGAAGCAAAAAATCAAGAACTAGCTGCTGAAAATGCCGAT
TTGAGGGCATTATTGCGATCAATGCAGGGTGACATGCGTGAGTTCTTAAATGCCCCAAAT
GGTTCTTCTAGGCAGTCAGCAACAAGCAATGACAGGCTAGATGCAGATCACTTGCAGTCT
GCGTTAGGTGGCAGAACGGACGTTTTTGATCTGCCTCTCCACATGGCTCGGGATCAAATT
GAGGAAAGTCTGCGAAACAAGATGGCTTCTATCAAGGAGCGAATGGGTCAACTACAAGAT
GCACAAAAGGGCGCAGAAGTTTCCTCAGAAGTAACAGAGAGAGAGCTTGAGCTAGAAGCT
CAGCTTGTTGAGGCCAGGAGCATAATCCAAGAGCAGGCATCGATTATGTCCAAACATCTT
ACCAAGTCTGAGAAGCCAAGGCGATTGAGTGGCCATATGAATTCTGAGAGGGACCTACTC
ATTTCGAGCCCAACTGAGGTATCAACAGTGAAATTTTGCTTTAGCTTCTCATGTCAATGA

Peptide Sequence

PEP ID

XP_016511039.1
PEP Infomation

PREDICTED: afadin- and alpha-actinin-binding protein-like [Nicotiana tabacum]
Sequence

MPPTDNDFDLRRTSTPPSGMGISEYNFADINNLEHCAKYLNQTLVTFGFPASLDLFAHDP
VSIARTCNCVYALLQQRQRDIEFRVSANEQRQRLLSDISRLEAKVERLESQIQAKDREIA
TITREEAKATAALKAQIDKLQKERDEFQRMVLGNQQVRTQQIYEMKKKEKEYIKLQERLN
QVLMEKKKESRSGMEIMNLLQKEGRQRGTWNGKKADNDFYKKIVDAYEAKNQELAAENAD
LRALLRSMQGDMREFLNAPNGSSRQSATSNDRLDADHLQSALGGRTDVFDLPLHMARDQI
EESLRNKMASIKERMGQLQDAQKGAEVSSEVTERELELEAQLVEARSIIQEQASIMSKHL
TKSEKPRRLSGHMNSERDLLISSPTEVSTVKFCFSFSCQ

Transcript Sequence

Gene sequence data has not been registered.